| Place | Performance | Athlete | Team |
| 1 | 04:56.44 | LETHIBELANE - NYAKALLO | HORSKOOL CR SWART |
| 2 | 05:08.17 | BARNARD - ANDREW | HORSKOOL CR SWART |
| 3 | 05:14.56 | MOGALOI - OLUGAHO | CENTURION SECONDARY SCHOOL |
| 4 | 05:15.32 | SIYOTHULA - AZAKHE | WILLOWRIDGE HIGH SCHOOL |
| 5 | 05:20.04 | SEQOA - BOKANG | AMBERFIELD COLLEGE |
| 6 | 05:21.15 | KEBINELANG - GOFAONE | WILLOWRIDGE HIGH SCHOOL |
| 7 | 05:21.18 | CHERE - KANO | MARAGON MOOIKLOOF |
| 8 | 05:23.70 | NEO - MAISELA | REDDFORD HOUSE THE HILL |
| 9 | 05:25.54 | MCNAUGE - AXEL | MARAGON MOOIKLOOF |
| 10 | 05:48.37 | DUBE - SIBUSISO | CENTURION SECONDARY SCHOOL |
| 11 | 05:54.40 | BALOYI - VUKOSI | CURRO ROODEPLAAT |