| Place | Performance | Athlete | Team |
| 1 | 04:07.33 | VAN DER LEEK - XAVIER | MIDSTREAM COLLEGE |
| 2 | 04:07.39 | VISAGIE - FRANCOIS | HORSKOOL ZWARTKOP |
| 3 | 04:07.98 | BREYTENBACH - JUAN | MIDSTREAM COLLEGE |
| 4 | 04:09.50 | BRONKHORST - LUANDRE | HORSKOOL ZWARTKOP |
| 5 | 04:11.48 | DE VRIES - DIVAN | AFRIKAANS HOR SEUNS |
| 6 | 04:12.84 | TIMATI - LUTHO | CURRO HAZELDEAN |
| 7 | 04:14.25 | MEKO - RETHABILE | CURRO HAZELDEAN |
| 8 | 04:17.41 | CAMARA-DE FRETAS - CARLOS | TUKS SPORT |
| 9 | 04:20.50 | ROELOFSE - JOHAN | HORSKOOL MENLOPARK BLOU |
| 10 | 04:23.22 | NINHAM - LUKE | AFRIKAANS HOR SEUNS |
| 11 | 04:30.21 | DE BEER - NAAS | MONTANA HORSKOOL |
| 12 | 04:35.06 | GROENEWALD - ERIC | HORSKOOL MENLOPARK WIT |
| 13 | 04:36.25 | GAULD - JONOTHAN | PRETORIA BOYS HIGH A-TEAM |
| 14 | 04:37.12 | CILLIERS - RIGARDT | AFRIKAANS HOR SEUNS IND |
| 15 | 04:37.30 | THWALA - KHWEZI | SUTHERLAND HIGH SCHOOL |
| 16 | 04:38.14 | RADEMEYER - ETHAN | PRETORIA BOYS HIGH A-TEAM |
| 17 | 04:41.88 | LE CORNU - BEN | AFRIKAANS HOR SEUNS IND |
| 18 | 04:42.25 | MASOKWE - KAGISO | CURRO HAZELDEAN |
| 19 | 04:43.17 | JIYANA - SIBUSISO | THE GLEN HIGH SCHOOL |
| 20 | 04:43.52 | LOTZ - CHRISTIAAN | HORSKOOL GARSFONTEIN |
| 21 | 04:45.82 | JORDAAN - STEPHAN | HORSKOOL MENLOPARK WIT |
| 22 | 04:53.06 | KEET - HIRO | PRETORIA BOYS HIGH A-TEAM |
| 23 | 04:56.71 | MYBURG - ZANDER | HORSKOOL MENLOPARK WIT |
| 24 | 05:29.28 | MATHIBELA - BHEKISIZWE | THE GLEN HIGH SCHOOL |
| 25 | 05:29.29 | MOTAUNG - KARABO | UITSIG HIG SCHOOL |
| 26 | 05:53.07 | SESHOKA - OMPHILE | CURRO THATCHFIELD |