| Place | Performance | Athlete | Team |
| 1 | 04:15.42 | SEPTEMBER - APHELELE JUNIOR | EASTERN CAPE LSEN |
| 2 | 04:18.76 | SYKES - CLINT | WESTERN CAPE LSEN |
| 3 | 04:21.02 | GAVHI - BASIMANE | GAUTENG LSEN |
| 4 | 04:21.50 | SKHOSANA - THAMSANXA | GAUTENG LSEN |
| 5 | 04:30.35 | LETSOALO - ANSWER | GAUTENG LSEN |
| 6 | 04:31.80 | MOIMAKWE - TSHEPISO | GAUTENG LSEN |
| 7 | 04:32.87 | MARAIS - DEE-VON | WESTERN CAPE LSEN |
| 8 | 04:37.02 | GHALL - DEANNO | WESTERN CAPE LSEN |
| 9 | 04:37.59 | REFILWE - MOSHOALIBA | FREESTATE LSEN |
| 10 | 04:41.59 | VAN DER BYL - RUMANO | WESTERN CAPE LSEN |
| 11 | 04:45.07 | PHOLOANE - AKANYANG | NORTHERN CAPE LSEN |
| 12 | 04:46.02 | BESUTU - MVANA | KWA-ZULU NATAL LSEN |
| 13 | 04:47.86 | AFRIKANDER - HECTOR | GAUTENG LSEN |
| 14 | 04:57.65 | MOKITLANA - PHILAMON T | LIMPOPO LSEN |
| 15 | 04:59.78 | LIWANE - ANESU | MPUMALANGA LSEN |
| 16 | 05:13.16 | MDUDU - LUYANDA | KWA-ZULU NATAL LSEN |
| 17 | 05:22.85 | TSHEPANG - TSHOBANE | FREESTATE LSEN |
| 18 | 05:25.67 | MAKHOBA - AKHONA | KWA-ZULU NATAL LSEN |
| 19 | 05:35.79 | KHOZA - LWANDILE | KWA-ZULU NATAL LSEN |
| 20 | 05:37.15 | TEBOHO - RAMABOLU | FREESTATE LSEN |