| Place | Performance | Athlete | Team |
| 1 | 03:59.10 | FANISE - RETSHEPILE | VORENTOE BOYS |
| 2 | 04:00.46 | DE FOUW - CORNE | MONUMENT BOYS |
| 3 | 04:02.98 | LEIJENAAR - RICO | POTCHEFSTROOM GIMNASIUM BOYS |
| 4 | 04:05.04 | MAKOLOMAKWA - SIFISO | PRESTIGE COLLEGE BOYS |
| 5 | 04:08.27 | THAPANE - LESEGO | PRESTIGE COLLEGE BOYS |
| 6 | 04:09.28 | ROELOFSE - JOHAN | MENLOPARK BOYS |
| 7 | 04:10.08 | TALJAARD - RUAN | WESVALIA BOYS |
| 8 | 04:10.88 | DELPORT - JOHAN | ZWARTKOP BOYS |
| 9 | 04:11.65 | DE WET - JAYDEN | HELPMEKAAR BOYS |
| 10 | 04:12.78 | TIMATHI - LUTHO | VORENTOE BOYS |
| 11 | 04:14.08 | MOUTON - KIAN | NELSPRUIT BOYS |
| 12 | 04:14.12 | TATAI - AMOGELANG | KLERSKDORP BOYS |
| 13 | 04:16.72 | DE VILLIERS - NICO | GARSFONTEIN BOYS |
| 14 | 04:18.27 | ADAMS - SHANE JOSHUA | PAARL GIM BOYS |
| 15 | 04:19.55 | VAN DER LEEK - XAVIER | MIDSTREAM COLLEGE BOYS |
| 16 | 04:22.51 | ENDRODY - MATTHEW | AFFIES SEUNS |
| 17 | 04:25.77 | DE WIT - EBEN | MIDSTREAM COLLEGE BOYS |
| 18 | 04:26.72 | MARAIS - KEVIN | RANDBURG BOYS |
| 19 | 04:27.12 | PRINS - MARCO | RANDBURG BOYS |
| 20 | 04:28.01 | MEYER - AJ | KEMPTON PARK SEUNS |
| 21 | 04:30.84 | VAN DRIEL - EDUARD | PRETORIA BOYS HIGH |
| 22 | 04:30.93 | VAN DER WERF - LEONARDO | PAARL BOYS HIGH |
| 23 | 04:31.24 | NOVEMBER - JUEYREN | HTS DROSTDY BOYS |
| 24 | 04:32.54 | VAN DER MERWE - KEAGAN | ZWARTKOP BOYS |
| 25 | 04:32.70 | DE BEER - NAAS | MONTANA BOYS |
| 26 | 04:33.15 | PRETORIUS - JP | CENTURION SEUNS |
| 27 | 04:36.09 | CLOETE - DAMIAN | PRETORIA BOYS HIGH |
| 28 | 04:37.96 | MOGOKONYANE - BOKIANYO | RANDFONTEIN BOYS |
| 29 | 04:52.38 | DIAZ - MWAMKO | UITSIG BOYS |
| 30 | 04:53.77 | KGOATLA - ZAMA | FOURWAYS HIGH BOYS |
| 31 | 05:02.01 | SYFERS - LEE-TIN | HTS DROSTDY BOYS |
| 32 | 05:02.47 | GOUWS - ALRU | BOLAND LANDBOU |
| 33 | 05:03.14 | SCOTT - JASON | CHARLIE HOFMEYER BOYS |
| 34 | 05:04.03 | MOYO - ZAMMY | FOURWAYS HIGH BOYS |