| Place | Performance | Athlete | Team |
| 1 | 04:07.48 | Q: BOTHLOLO - SOLOMON | TUT |
| 2 | 04:07.80 | Q: MUNZHELELE - DZULANI | FARRANANI |
| 3 | 04:10.67 | Q: KOOPMAN - JASON | ECAC |
| 4 | 04:12.02 | Q: WIID - FOURIE | TUKS |
| 5 | 04:12.50 | q: JOUBERT - JAN | PHOBIANS |
| 6 | 04:15.38 | q: RUTHVEN - MARCO(17470) | ECAC |